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Search Target and Search Fields

When you create a Rock Maker Search, you need to define what you want Rock Maker to look for, and where you want Rock Maker to look.

 

Search Target

Before you filter your results, you need to tell Rock Maker where it should look and what it should start looking for when launching a Search and Filter. In the main workspace of Search and Filter, you will see boxes for Search Path and Search Target. The Search Path can be a folder, project, or your entire database.

The Search Target is the type of information Rock Maker should look for when searching the database. Do you want information about a Project, Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, Region Annotation, Screen and /or Screen Hits?

 

Search Fields

Given that each experiment has so many parameters, in Rock Maker we provide multiple search categories -- which we refer to as Search Fields -- so that you can be as specific as you like about the results you want Rock Maker to display.

Search Fields

 

The more specific your search – or the more Search Fields you define -- the more relevant your results will be.

The list below explains the description of each category found on the Search Fields tab, and the Search Target(s) that can be used for each Search Field category.

 

ClosedCapture Result

The Capture Result contains two categories: Date Imaged and Profile Name. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Date Imaged The date when you imaged the plate.
Profile Name The imaging settings of your imaging process.

 

ClosedExperiment Plate

The Experiment Plate contains six categories: Barcode, Date Dispensed, ID, Name, Notes, and Number. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Barcode The experiment barcode number (it usually displays the last three digits of the barcode number).
Date Dispensed The date when you dispensed your plate.
ID The experiment ID number (it usually displays the middle three digits of the barcode number).
Name The experiment name.
Notes The experiment notes.
Number The experiment number (it usually displays the first digit of the barcode number).

 

ClosedExperiment

The Experiment contains eleven categories: Container, Date Prepared, ID, Incubation Temp., Name, Notebook Page Number, Notes, Owner, Project Name, Seeding, and Setup Temp. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Container The plate name.
Date Prepared The date when you prepared the experiment.
ID The experiment ID number.
Incubation Temp. The incubation temperature.
Name The experiment name.
Notebook Page Number The note book page number.
Notes The experiment notes.
Owner The experiment owner.
Project Name The project name.
Seeding Seeding your experiment.
Setup Temp. The setup temperature.

 

ClosedProtein Formulation Ingredient

The Protein Formulation Ingredient contains six categories: Conc. mg/mL, Conc. mM, Lot, Molecular Weight, Name, and Type. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation from the Search Target list is selected.

Search Field Sub-Category Description
Conc. mg/mL The protein formulation ingredient concentration (in mg/mL).
Conc. mM The protein formulation ingredient concentration (in mM).
Lot The protein formulation ingredient lot.
Molecular Weight The protein formulation ingredient molecular weight.
Name The protein formulation ingredient name.
Type The protein formulation ingredient type.

 

ClosedProtein Formulation Standard Ingredient

The Protein Formulation Standard Ingredient contains five categories: Concentration, Concentration Units, Long Name, pH, and Type. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region from the Search Target list is selected.

Search Field Sub-Category Description
Concentration The protein formulation standard ingredient concentration.
Concentration Units The protein formulation standard ingredient concentration units.
Long Name The protein formulation standard ingredient long name.
pH The protein formulation standard ingredient pH.
Type The protein formulation standard ingredient type.

 

ClosedProtein Formulation

The Protein Formulation contains eight categories: Class, Date Prepared, Extinction Coefficient, Name, Notebook Page Number, Notes, Storage Temp, and Volume. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Class The protein formulation class.
Date Prepared The date when you prepared the protein formulation.
Extinction Coefficient The protein formulation extinction coefficient.
Name The protein formulation name.
Notebook Page Number The notebook page number.
Notes The protein formulation notes.
Storage Temp. The storage temperature.
Volume The protein formulation volume.

 

ClosedRegion Annotation

The Region Annotation contains three categories: Text, Type button, and Type Name. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Text The region annotation text.
Type Icon The region annotation type icon.
Type Name The region annotation type name.

 

ClosedRegion

The Region contains two categories: Name and Type Name. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Name The region name.
Type Name The region type name.

 

ClosedUsed Screen

The Used Screen contains one category: Name. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Name The used screen name.

 

ClosedWell Drop Score

The Well Drop Score contains five categories: Date Imaged, Group Name, Hot Key, Name, and Score Value. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Date Imaged The date when you imaged the plate.
Group Name The well drop score group name.
Hot Key The well drop score hot key.
Name The well drop score name.
Score Info The well drop score info.
Score Value The well drop score value.

 

ClosedWell Drop

The Well Drop contains three categories: Number, Protein Volume, and Well Volume. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation options from the Search Target list is selected.

Search Field Sub-Category Description
Number The well drop number.
Protein Volume The well drop protein volume.
Well Volume The well drop volume.

 

ClosedWell Ingredient

The Well Ingredient contains ten categories: Concentration, Concentration Units, High pH Volume, Long Name, Low pH Volume, pH, Pre Mixed Concentration, Short Name, Type, and Volume. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, or Region Annotation from the Search Target list is selected.

Search Field Sub-Category Description
Concentration The well ingredient concentration.
Concentration Units The well ingredient concentration units.
High pH Volume The well ingredient high pH volume.
Long Name The well ingredient long name.
Low pH Volume The well ingredient low pH volume.
pH The well ingredient pH.
Pre Mixed Concentration The well ingredient pre mixed concentration.
Short Name The well ingredient short name.
Type The well ingredient type.
Volume The well ingredient volume.

 

ClosedWell

The Well contains six categories: Column Number, Number, Row Letter, Volume, Water Volume, and Well name. It will appear when the Experiment, Protein Formulation, Experiment Plate, Well, Well Drop, Well Ingredient, and Region Annotation options in the Search Target list is selected.

Search Field Sub-Category Description
Column Number The well column number.
Number The well number.
Row Letter The well row letter.
Volume The well volume.
Water Volume The well water volume.
Well Name The well name.

 

ClosedScreen Hits

The Screen Hits contains five categories: Hit Rate, Hits, Screen Name, Users, and Well Number. It will appear when the Screen Hits option in Search Target selected. Please make sure that you have selected the screen hits score first before clicking the Search button.

Search Field Sub-Category Description
Hit Rate The result from the calculation of Hits divided by Users column and multiplied 100%.
Hits The experiment hits of selected screen hits scores.
Screen Name The experiment screen name of selected screen hits scores.
Users The experiment user of selected screen hits scores.
Well Number The experiment well number of selected screen hits scores.

 

ClosedScreen

The Screen contains two categories: Ingredient Name and Name. It will appear when the Screen option in the Search Target list is selected.

Search Field Sub-Category Description
Ingredient Name The screen ingredient name.
Name The screen name.

 

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